1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi1g38010

Bradi1g38010


Description : Ribosomal protein S24e family protein


Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g38010
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
271584 No alias Ribosomal protein S24e family protein 0.05 Orthogroups_2024-Update
Cre10.g456200 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
Glyma.10G160300 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
Glyma.19G242700 No alias Ribosomal protein S24e family protein 0.04 Orthogroups_2024-Update
Glyma.20G228100 No alias Ribosomal protein S24e family protein 0.03 Orthogroups_2024-Update
LOC_Os01g52490 No alias 40S ribosomal protein S24, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g36160 No alias 40S ribosomal protein S24, putative, expressed 0.02 Orthogroups_2024-Update
MA_119894g0010 No alias (at3g04920 : 188.0) Ribosomal protein S24e family... 0.02 Orthogroups_2024-Update
PSME_00005358-RA No alias (at3g04920 : 189.0) Ribosomal protein S24e family... 0.04 Orthogroups_2024-Update
Pp1s204_49V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s37_112V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s450_9V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Sobic.003G280700.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.004G099500.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.010G166100.1 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc06g084230 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g065330 No alias 40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen09g027090 No alias Ribosomal protein S24e 0.05 Orthogroups_2024-Update
evm.model.contig_2036.17 No alias (at3g04920 : 137.0) Ribosomal protein S24e family... 0.03 Orthogroups_2024-Update
evm.model.tig00000361.64 No alias (at3g04920 : 129.0) Ribosomal protein S24e family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 29 107
No external refs found!