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  5. Bradi1g38400

Bradi1g38400


Description : TRICHOME BIREFRINGENCE-LIKE 24


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g38400
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
404468 No alias TRICHOME BIREFRINGENCE-LIKE 23 0.03 Orthogroups_2024-Update
At1g01430 No alias Protein trichome birefringence-like 25... 0.02 Orthogroups_2024-Update
Bradi2g58580 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Brara.J01923.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G122073 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.03 Orthogroups_2024-Update
GRMZM6G880411 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.02 Orthogroups_2024-Update
Potri.010G095700 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.02 Orthogroups_2024-Update
Potri.017G110200 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.05 Orthogroups_2024-Update
Pp1s106_209V6 No alias F6F3.23; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Seita.5G246900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G400100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g003610 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen02g034410 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 143 433
IPR025846 PMR5_N_dom 88 140
No external refs found!