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  5. Bradi1g38630

Bradi1g38630


Description : plastid-specific ribosomal protein 4


Gene families : OG_42_0003423 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g38630
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Brara.E00706.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
GRMZM2G058250 No alias plastid-specific ribosomal protein 4 0.04 Orthogroups_2024-Update
Glyma.01G114800 No alias plastid-specific ribosomal protein 4 0.04 Orthogroups_2024-Update
Glyma.03G063200 No alias plastid-specific ribosomal protein 4 0.03 Orthogroups_2024-Update
HORVU7Hr1G079190.2 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
MA_202598g0010 No alias (at2g38140 : 82.0) plastid-specific ribosomal protein 4... 0.04 Orthogroups_2024-Update
Potri.016G113700 No alias plastid-specific ribosomal protein 4 0.06 Orthogroups_2024-Update
Pp1s258_80V6 No alias 30s ribosomal protein s31 0.04 Orthogroups_2024-Update
Pp1s29_213V6 No alias F16M14.7; chloroplast 30S ribosomal protein S31 (PSRP4)... 0.05 Orthogroups_2024-Update
Seita.4G218100.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Sobic.002G273100.1 No alias component *(bTHXm) of small mitoribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Sobic.003G393800.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Solyc05g052710 No alias 30S ribosomal protein S31 (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR030826 Ribo_THX 23 104
No external refs found!