Sopen06g023870

Description : Ribosomal prokaryotic L21 protein

Gene families : OG_42_0002830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g023870
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g09730	No alias	Ribosomal protein L21	0.08	Orthogroups_2024-Update
Brara.H00579.1	No alias	component *(bL21c) of large plastid ribosomal-subunit proteome	0.1	Orthogroups_2024-Update
GRMZM2G018403	No alias	Ribosomal protein L21	0.03	Orthogroups_2024-Update
HORVU6Hr1G041020.1	No alias	component *(bL21c) of large plastid ribosomal-subunit proteome	0.1	Orthogroups_2024-Update
LOC_Os02g15900	No alias	50S ribosomal protein L21, chloroplast precursor,...	0.02	Orthogroups_2024-Update
Potri.013G112900	No alias	Ribosomal protein L21	0.05	Orthogroups_2024-Update
Potri.019G083400	No alias	Ribosomal protein L21	0.13	Orthogroups_2024-Update
Seita.1G012400.1	No alias	component *(bL21c) of large plastid ribosomal-subunit proteome	0.11	Orthogroups_2024-Update
Sobic.004G116100.1	No alias	component *(bL21c) of large plastid ribosomal-subunit proteome	0.11	Orthogroups_2024-Update
Sobic.009G228300.1	No alias	component *(bL21m) of large mitoribosomal-subunit proteome	0.02	Orthogroups_2024-Update
Solyc06g065390	No alias	50S ribosomal protein L21, chloroplastic (AHRD V3.3 ***...	0.07	Orthogroups_2024-Update
evm.model.tig00001371.5	No alias	(at4g30930 : 87.0) Encodes a ribosomal RPL21M protein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR028909	L21p-like	94	194

External Links

No external refs found!