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  5. Bradi1g42640

Bradi1g42640


Description : Mitochondrial glycoprotein family protein


Gene families : OG_42_0001442 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g42640
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
A4A49_09350 No alias uncharacterized protein, mitochondrial 0.02 Orthogroups_2024-Update
At5g02050 No alias At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6] 0.04 Orthogroups_2024-Update
Brara.C00053.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.J02908.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G251000 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Glyma.18G187800 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G011460.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G011560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G046980.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00000622-RA No alias (at5g02050 : 166.0) Mitochondrial glycoprotein family... 0.02 Orthogroups_2024-Update
PSME_00002240-RA No alias (at5g02050 : 153.0) Mitochondrial glycoprotein family... 0.02 Orthogroups_2024-Update
Potri.006G090700 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Potri.010G198600 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Sobic.003G075200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003428 MAM33 85 264
No external refs found!