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  5. Sopen06g024170

Sopen06g024170


Description : PPR repeat family


Gene families : OG_42_0009807 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g024170
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Brara.J02240.1 No alias abscisic acid perception modulator *(SOAR) 0.05 Orthogroups_2024-Update
Sobic.010G249900.2 No alias abscisic acid perception modulator *(SOAR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 435 464
IPR002885 Pentatricopeptide_repeat 226 245
IPR002885 Pentatricopeptide_repeat 323 352
IPR002885 Pentatricopeptide_repeat 470 514
IPR002885 Pentatricopeptide_repeat 361 408
IPR002885 Pentatricopeptide_repeat 256 305
No external refs found!