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  5. Bradi1g43740

Bradi1g43740


Description : TRICHOME BIREFRINGENCE-LIKE 19


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g43740
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
GRMZM6G880411 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.03 Orthogroups_2024-Update
Glyma.19G041600 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.03 Orthogroups_2024-Update
HORVU7Hr1G042930.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00020113-RA No alias (at1g26850 : 85.1) S-adenosyl-L-methionine-dependent... 0.02 Orthogroups_2024-Update
Sopen02g015810 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 131 422
IPR025846 PMR5_N_dom 77 130
No external refs found!