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  5. Sopen06g024300

Sopen06g024300


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g024300
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
At5g52020 No alias Ethylene-responsive transcription factor ERF025... 0.03 Orthogroups_2024-Update
Bradi1g72449 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g58980 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00653.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A03156.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.E00145.1 No alias subgroup ERF-VI transcription factor & transcription... 0.07 Orthogroups_2024-Update
Brara.K00718.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Cre16.g674890 No alias cytokinin response factor 2 0.03 Orthogroups_2024-Update
GRMZM2G019443 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.10G239400 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Glyma.13G166700 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g28350 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G351800.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Seita.6G235100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G179900.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G164800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Solyc01g090310 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc08g078420 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!