Bradi1g44390

Description : ARM repeat superfamily protein

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g44390
Cluster	HCCA clusters: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Brara.C01808.1	No alias	E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
Brara.C03699.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
GRMZM2G041141	No alias	plant U-box 26	0.03	Orthogroups_2024-Update
GRMZM2G151204	No alias	CYS, MET, PRO, and GLY protein 1	0.03	Orthogroups_2024-Update
GRMZM2G168980	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
Glyma.18G042100	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
HORVU0Hr1G003810.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
MA_83739g0020	No alias	(at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS...	0.04	Orthogroups_2024-Update
PSME_00046041-RA	No alias	"(at5g64660 : 307.0) ""CYS, MET, PRO, and GLY protein...	0.04	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.04	Orthogroups_2024-Update
Potri.002G070500	No alias	plant U-box 29	0.03	Orthogroups_2024-Update
Potri.014G101100	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Seita.3G007400.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Seita.7G104100.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.004G245100.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Solyc01g005160	No alias	Avr9/Cf-9 rapidly elicited protein 1	0.04	Orthogroups_2024-Update
Solyc01g007000	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc04g008100	No alias	U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	41	113

External Links

No external refs found!

Bradi1g44390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation