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  5. Bradi1g45290

Bradi1g45290


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0010081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g45290
Cluster HCCA clusters: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
At1g34160 No alias Pentatricopeptide repeat-containing protein At1g34160... 0.03 Orthogroups_2024-Update
Brara.I02452.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G071986 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc04g072170 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen04g028340 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 461 584
IPR002885 Pentatricopeptide_repeat 328 354
IPR002885 Pentatricopeptide_repeat 294 320
IPR002885 Pentatricopeptide_repeat 262 289
IPR002885 Pentatricopeptide_repeat 148 180
No external refs found!