Sopen06g024430

Description : Synaptobrevin

Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g024430
Cluster	HCCA clusters: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
At2g32670	No alias	Vesicle-associated membrane protein 725...	0.03	Orthogroups_2024-Update
At3g54300	No alias	Vesicle-associated membrane protein 727...	0.02	Orthogroups_2024-Update
At4g15780	No alias	vesicle-associated membrane protein 724...	0.02	Orthogroups_2024-Update
Glyma.07G248300	No alias	vesicle-associated membrane protein 724	0.03	Orthogroups_2024-Update
Sobic.004G334900.1	No alias	R-type VAMP7-group component of SNARE longin membrane...	0.02	Orthogroups_2024-Update
evm.model.contig_2286.28	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
evm.model.tig00000880.46	No alias	(at5g22360 : 152.0) Member of Synaptobrevin-like...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010908	Longin_dom	29	108
IPR001388	Synaptobrevin	124	211

External Links

No external refs found!