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  5. Bradi1g46230

Bradi1g46230


Description : global transcription factor group A2


Gene families : OG_42_0003156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g46230
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
96727 No alias global transcription factor group A2 0.02 Orthogroups_2024-Update
Cre01.g031050 No alias global transcription factor group A2 0.02 Orthogroups_2024-Update
Glyma.04G240900 No alias global transcription factor group A2 0.07 Orthogroups_2024-Update
Glyma.06G122500 No alias global transcription factor group A2 0.06 Orthogroups_2024-Update
HORVU7Hr1G035280.2 No alias component *(SPT5) of SPT4/5 transcription elongation... 0.03 Orthogroups_2024-Update
MA_10434986g0010 No alias (at4g08350 : 1091.0) global transcription factor group... 0.06 Orthogroups_2024-Update
Potri.009G124200 No alias global transcription factor group A2 0.03 Orthogroups_2024-Update
evm.model.contig_498.3 No alias (at4g08350 : 215.0) global transcription factor group A2... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR005824 KOW 492 519
IPR022581 Spt5_N 102 190
IPR005100 NGN-domain 196 277
No external refs found!