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Description : cyclic nucleotide-binding transporter 1
Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g46260 | |
| Cluster | HCCA clusters: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18102 | No alias | cyclic nucleotide-gated ion channel 1 | 0.04 | Orthogroups_2024-Update | |
| A4A49_63668 | No alias | cyclic nucleotide-gated ion channel 1 | 0.01 | Orthogroups_2024-Update | |
| At2g24610 | No alias | cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] | 0.01 | Orthogroups_2024-Update | |
| At5g57940 | No alias | Probable cyclic nucleotide-gated ion channel 5... | 0.01 | Orthogroups_2024-Update | |
| Brara.C02872.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.02 | Orthogroups_2024-Update | |
| Brara.E00133.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G074317 | No alias | Cyclic nucleotide-regulated ion channel family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G257133 | No alias | cyclic nucleotide gated channel 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.09G168500 | No alias | cyclic nucleotide-binding transporter 1 | 0.01 | Orthogroups_2024-Update | |
| HORVU5Hr1G065950.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G088830.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.02 | Orthogroups_2024-Update | |
| MA_212367g0010 | No alias | (at3g17700 : 183.0) cyclic nucleotide-binding... | 0.02 | Orthogroups_2024-Update | |
| Mp6g01920.1 | No alias | cyclic nucleotide-gated cation channel (CNGC) | 0.01 | Orthogroups_2024-Update | |
| PSME_00005940-RA | No alias | (at5g15410 : 820.0) 'defense, no death' gene (DND1)... | 0.01 | Orthogroups_2024-Update | |
| Potri.002G170000 | No alias | cyclic nucleotide gated channel 10 | 0.02 | Orthogroups_2024-Update | |
| Potri.003G183000 | No alias | cyclic nucleotide gated channel 8 | 0.02 | Orthogroups_2024-Update | |
| Potri.012G002200 | No alias | cyclic nucleotide gated channel 1 | 0.02 | Orthogroups_2024-Update | |
| Potri.014G097900 | No alias | cyclic nucleotide gated channel 1 | 0.01 | Orthogroups_2024-Update | |
| Potri.015G019100 | No alias | cyclic nucleotide gated channel 1 | 0.01 | Orthogroups_2024-Update | |
| Potri.015G033900 | No alias | cyclic nucleotide-binding transporter 1 | 0.01 | Orthogroups_2024-Update | |
| Seita.1G346900.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.06 | Orthogroups_2024-Update | |
| Seita.4G168400.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.02 | Orthogroups_2024-Update | |
| Seita.7G259800.1 | No alias | cyclic nucleotide-gated cation channel *(CNGC) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | ion channel activity | IEA | InterProScan predictions |
| BP | GO:0006811 | ion transport | IEA | InterProScan predictions |
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005821 | Ion_trans_dom | 181 | 506 |
| No external refs found! |