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  5. Bradi1g46550

Bradi1g46550


Description : CTC-interacting domain 7


Gene families : OG_42_0003543 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g46550
Cluster HCCA clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G057200 No alias CTC-interacting domain 7 0.03 Orthogroups_2024-Update
Glyma.17G219600 No alias CTC-interacting domain 7 0.03 Orthogroups_2024-Update
HORVU7Hr1G034080.8 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_10429553g0010 No alias (at2g26280 : 325.0) smr (Small MutS Related)... 0.03 Orthogroups_2024-Update
MA_8527101g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.9G518500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g016700 No alias Smr domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009818 Ataxin-2_C 25 36
IPR013899 DUF1771 385 448
No external refs found!