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  5. Bradi1g46760

Bradi1g46760


Description : regulatory particle triple-A 1A


Gene families : OG_42_0002955 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g46760
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cre14.g625400 No alias regulatory particle triple-A 1A 0.04 Orthogroups_2024-Update
Glyma.03G262800 No alias regulatory particle triple-A 1A 0.03 Orthogroups_2024-Update
Glyma.16G015500 No alias regulatory particle triple-A 1A 0.02 Orthogroups_2024-Update
Glyma.19G261800 No alias regulatory particle triple-A 1A 0.03 Orthogroups_2024-Update
HORVU6Hr1G083150.1 No alias regulatory component *(RPT1) of 26S proteasome 0.05 Orthogroups_2024-Update
Seita.1G343700.1 No alias regulatory component *(RPT1) of 26S proteasome 0.04 Orthogroups_2024-Update
Sopen06g022590 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update
evm.model.tig00021464.16 No alias (at1g53750 : 664.0) 26S proteasome AAA-ATPase subunit... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 205 337
No external refs found!