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  5. Bradi1g46840

Bradi1g46840


Description : Ribosomal protein L35Ae family protein


Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brachypodium release: Bradi1g46840
  • Sequence
  • Bradi2g32640

    • Bradi2g32640


    Description : ribosomal protein large subunit 16A

    Cluster HCCA clusters: Cluster_57

    Target Alias Description ECC score Gene Family Method Actions
    At1g07070 No alias 60S ribosomal protein L35a-1... 0.04 Orthogroups_2024-Update
    At1g41880 No alias 60S ribosomal protein L35a-2... 0.03 Orthogroups_2024-Update
    At1g74270 No alias 60S ribosomal protein L35a-3... 0.03 Orthogroups_2024-Update
    Brara.B02119.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
    Brara.D00376.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
    Brara.G03191.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
    Brara.I03824.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
    Cre10.g459250 No alias Ribosomal protein L35Ae family protein 0.09 Orthogroups_2024-Update
    GRMZM2G181336 No alias Ribosomal protein L35Ae family protein 0.04 Orthogroups_2024-Update
    GRMZM5G890561 No alias Ribosomal protein L35Ae family protein 0.07 Orthogroups_2024-Update
    Glyma.02G253500 No alias Ribosomal protein L35Ae family protein 0.03 Orthogroups_2024-Update
    Glyma.05G132500 No alias Ribosomal protein L35Ae family protein 0.07 Orthogroups_2024-Update
    Glyma.08G087000 No alias Ribosomal protein L35Ae family protein 0.13 Orthogroups_2024-Update
    Glyma.14G062900 No alias Ribosomal protein L35Ae family protein 0.07 Orthogroups_2024-Update
    HORVU6Hr1G026460.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
    HORVU7Hr1G031850.4 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
    Kfl00148_0220 kfl00148_0220_v1.1 (at3g55750 : 81.6) Ribosomal protein L35Ae family... 0.09 Orthogroups_2024-Update
    MA_79041g0010 No alias (at1g74270 : 149.0) Ribosomal protein L35Ae family... 0.03 Orthogroups_2024-Update
    Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.07 Orthogroups_2024-Update
    PSME_00007301-RA No alias (at1g74270 : 157.0) Ribosomal protein L35Ae family... 0.08 Orthogroups_2024-Update
    Potri.008G059400 No alias Ribosomal protein L35Ae family protein 0.04 Orthogroups_2024-Update
    Potri.010G194200 No alias Ribosomal protein L35Ae family protein 0.07 Orthogroups_2024-Update
    Pp1s102_133V6 No alias 60s ribosomal protein 0.06 Orthogroups_2024-Update
    Pp1s1_549V6 No alias 60s ribosomal protein 0.1 Orthogroups_2024-Update
    Pp1s2_655V6 No alias 60s ribosomal protein 0.09 Orthogroups_2024-Update
    Pp1s52_116V6 No alias 60s ribosomal protein 0.12 Orthogroups_2024-Update
    Pp1s61_123V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
    Seita.4G043000.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
    Sobic.002G179300.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
    Sobic.004G322200.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
    Sobic.010G070500.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
    Solyc03g096360 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.09 Orthogroups_2024-Update
    Solyc05g052810 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.08 Orthogroups_2024-Update
    Sopen03g026480 No alias Ribosomal protein L35Ae 0.09 Orthogroups_2024-Update
    Sopen05g031320 No alias Ribosomal protein L35Ae 0.05 Orthogroups_2024-Update
    evm.model.contig_2130.2 No alias (at1g74270 : 120.0) Ribosomal protein L35Ae family... 0.12 Orthogroups_2024-Update
    evm.model.tig00020723.23 No alias (at3g55750 : 148.0) Ribosomal protein L35Ae family... 0.1 Orthogroups_2024-Update

    Type GO Term Name Evidence Source
    MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
    CC GO:0005622 intracellular IEA InterProScan predictions
    CC GO:0005840 ribosome IEA InterProScan predictions
    BP GO:0006412 translation IEA InterProScan predictions
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    Type GO Term Name Evidence Source
    MF GO:0004096 catalase activity IEP Predicted GO
    MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
    MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
    InterPro domains Description Start Stop
    IPR001780 Ribosomal_L35A 12 106
    No external refs found!