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  5. Bradi1g48050

Bradi1g48050


Description : Raffinose synthase family protein


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g48050
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
A4A49_20430 No alias putative galactinol--sucrose galactosyltransferase 2 0.04 Orthogroups_2024-Update
At3g57520 No alias Probable galactinol--sucrose galactosyltransferase 2... 0.04 Orthogroups_2024-Update
At5g20250 No alias Raffinose synthase family protein... 0.04 Orthogroups_2024-Update
Brara.B00875.1 No alias galactinol-sucrose galactosyltransferase 0.02 Orthogroups_2024-Update
Brara.I03971.1 No alias alkaline alpha-galactosidase *(SIP2) 0.04 Orthogroups_2024-Update
Brara.J01587.1 No alias galactinol-sucrose galactosyltransferase 0.02 Orthogroups_2024-Update
GRMZM2G077181 No alias seed imbibition 2 0.04 Orthogroups_2024-Update
Glyma.02G303300 No alias seed imbibition 1 0.03 Orthogroups_2024-Update
Glyma.14G010500 No alias seed imbibition 1 0.03 Orthogroups_2024-Update
Glyma.17G111400 No alias Raffinose synthase family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G048710.4 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
LOC_Os01g07530 No alias uncharacterized glycosyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g07600 No alias uncharacterized glycosyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00005363-RA No alias (at1g55740 : 295.0) seed imbibition 1 (SIP1); CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00005466-RA No alias (at5g20250 : 946.0) encodes a member of glycosyl... 0.05 Orthogroups_2024-Update
PSME_00025208-RA No alias (at1g55740 : 1032.0) seed imbibition 1 (SIP1); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00049278-RA No alias (at5g40390 : 807.0) Encodes a protein which might be... 0.03 Orthogroups_2024-Update
Potri.006G052800 No alias seed imbibition 2 0.03 Orthogroups_2024-Update
Potri.006G065700 No alias Raffinose synthase family protein 0.03 Orthogroups_2024-Update
Potri.007G123400 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Potri.016G002300 No alias seed imbibition 2 0.02 Orthogroups_2024-Update
Potri.016G054700 No alias seed imbibition 2 0.03 Orthogroups_2024-Update
Seita.2G081000.1 No alias alkaline alpha-galactosidase *(SIP2) 0.02 Orthogroups_2024-Update
Seita.5G119800.1 No alias raffinose synthase 0.04 Orthogroups_2024-Update
Sobic.010G057400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g065980 No alias alkaline alpha-galactosidase seed imbibition protein 0.02 Orthogroups_2024-Update
Sopen02g031260 No alias Raffinose synthase or seed imbibition protein Sip1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 107 827
No external refs found!