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  5. Solyc02g072120

Solyc02g072120


Description : ER lumen protein-retaining receptor (AHRD V3.3 *** K4B8I6_SOLLC)


Gene families : OG_42_0002688 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002688_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g072120
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Sopen09g034800 No alias ER lumen protein retaining receptor 0.04 Orthogroups_2024-Update
evm.model.tig00000829.17 No alias (at3g25040 : 245.0) Encodes ERD2b. a homolog of the... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0046923 ER retention sequence binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!