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  5. Bradi1g49997

Bradi1g49997


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g49997
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g09200 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.02 Orthogroups_2024-Update
At1g19890 No alias MGH3 [Source:UniProtKB/TrEMBL;Acc:A0A178WKL2] 0.02 Orthogroups_2024-Update
Bradi2g27720 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Brara.I05605.1 No alias histone H3 variant *(CENH3) 0.02 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g505500 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G078314 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G130079 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G171387 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G418258 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G227400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G130900 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G055200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G255602 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G015200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G266200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G058490.4 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU2Hr1G090210.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU4Hr1G073150.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
HORVU6Hr1G029190.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU6Hr1G029200.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G012820.2 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU7Hr1G024990.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G025200.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU7Hr1G034470.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00417_0090 kfl00417_0090_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
MA_210354g0010 No alias (at5g65360 : 227.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_259842g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
MA_561217g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Mp3g09090.1 No alias histone (H3) 0.03 Orthogroups_2024-Update
PSME_00005861-RA No alias (at5g65360 : 181.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00041692-RA No alias (at5g10980 : 139.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.02 Orthogroups_2024-Update
Seita.3G227400.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Seita.4G066000.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Sobic.006G076400.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.03 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.03 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.02 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.02 Orthogroups_2024-Update
Solyc11g010230 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.02 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.contig_3435.2 No alias (at5g10980 : 245.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00020960.54 No alias (at5g10980 : 159.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!