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  5. Bradi1g51177

Bradi1g51177


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0013468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g51177
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G019840.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 62 110
IPR002885 Pentatricopeptide_repeat 582 628
IPR002885 Pentatricopeptide_repeat 329 356
IPR002885 Pentatricopeptide_repeat 422 449
IPR002885 Pentatricopeptide_repeat 165 195
IPR002885 Pentatricopeptide_repeat 227 256
IPR002885 Pentatricopeptide_repeat 359 389
IPR002885 Pentatricopeptide_repeat 196 224
IPR002885 Pentatricopeptide_repeat 484 512
IPR002885 Pentatricopeptide_repeat 452 476
IPR002885 Pentatricopeptide_repeat 657 680
No external refs found!