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  5. Bradi1g51310

Bradi1g51310


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000306 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g51310
Cluster HCCA clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G079140.6 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc01g087280 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G07970.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 110 437
No external refs found!