Bradi1g51377

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0007676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007676_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g51377
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
PSME_00000144-RA	No alias	(at5g39710 : 261.0) EMBRYO DEFECTIVE 2745 (EMB2745);...	0.01	Orthogroups_2024-Update
PSME_00047156-RA	No alias	(at5g61990 : 541.0) Pentatricopeptide repeat (PPR)...	0.01	Orthogroups_2024-Update
Potri.001G020501	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.02	Orthogroups_2024-Update
Potri.015G105400	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.02	Orthogroups_2024-Update
Seita.5G077400.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Solyc07g045410	No alias	Pentatricopeptide repeat-containing family protein (AHRD...	0.01	Orthogroups_2024-Update
evm.model.tig00001623.10	No alias	(at5g04810 : 174.0) pentatricopeptide (PPR)...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	807	833
IPR002885	Pentatricopeptide_repeat	348	397
IPR002885	Pentatricopeptide_repeat	418	467
IPR002885	Pentatricopeptide_repeat	279	327
IPR002885	Pentatricopeptide_repeat	733	780
IPR002885	Pentatricopeptide_repeat	523	572
IPR002885	Pentatricopeptide_repeat	659	691
IPR002885	Pentatricopeptide_repeat	240	272
IPR002885	Pentatricopeptide_repeat	695	724
IPR002885	Pentatricopeptide_repeat	582	629

External Links

No external refs found!