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  5. Sopen06g025480

Sopen06g025480


Description : FAR1 DNA-binding domain


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g025480
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Bradi1g20830 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Bradi4g23625 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.14G043900 No alias FAR1-related sequence 3 0.03 Orthogroups_2024-Update
HORVU0Hr1G039600.3 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G340000.2 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g112320 No alias FAR1-related sequence 5 (AHRD V3.3 *** AT4G38180.1) 0.03 Orthogroups_2024-Update
Sopen03g036420 No alias FAR1 DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 337 423
IPR007527 Znf_SWIM 631 657
IPR004330 FAR1_DNA_bnd_dom 134 217
No external refs found!