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  5. Bradi1g53482

Bradi1g53482


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g53482
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
At1g31790 No alias Pentatricopeptide repeat-containing protein At1g31790... 0.05 Orthogroups_2024-Update
Brara.E01950.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G155000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.2G095100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G088800.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 277
IPR002885 Pentatricopeptide_repeat 389 419
IPR002885 Pentatricopeptide_repeat 149 172
IPR002885 Pentatricopeptide_repeat 287 316
IPR002885 Pentatricopeptide_repeat 178 203
No external refs found!