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  5. Bradi1g53640

Bradi1g53640


Description : SNF7 family protein


Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g53640
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Brara.A01110.1 No alias component *(VPS2/CHMP2) of ESCRT-III complex 0.03 Orthogroups_2024-Update
Cre04.g213450 No alias SNF7 family protein 0.02 Orthogroups_2024-Update
Cre17.g735400 No alias vacuolar protein sorting-associated protein 2.3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 186
No external refs found!