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  5. Bradi1g55720

Bradi1g55720


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g55720
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
A4A49_06130 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.02 Orthogroups_2024-Update
A4A49_39130 No alias leucine-rich repeat extensin-like protein 2 0.03 Orthogroups_2024-Update
At2g15880 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Orthogroups_2024-Update
Bradi1g14050 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Brara.I01137.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00899.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM5G805485 No alias leucine-rich repeat/extensin 1 0.05 Orthogroups_2024-Update
HORVU1Hr1G026650.5 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
HORVU6Hr1G016710.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
LOC_Os06g49100 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
MA_179279g0010 No alias (at3g24480 : 521.0) Leucine-rich repeat (LRR) family... 0.03 Orthogroups_2024-Update
Potri.006G162300 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.007G139200 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.010G083000 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.010G083100 No alias Leucine-rich repeat (LRR) family protein 0.05 Orthogroups_2024-Update
Potri.018G035100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Pp1s96_30V6 No alias T9E8.80; leucine-rich repeat family protein / extensin... 0.04 Orthogroups_2024-Update
Seita.1G092900.1 No alias LRR-domain extensin 0.06 Orthogroups_2024-Update
Seita.3G105100.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sobic.003G205600.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Sobic.004G035800.1 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
Solyc11g005150 No alias entensin X55687 0.02 Orthogroups_2024-Update
Sopen11g001150 No alias Leucine Rich Repeat 0.02 Orthogroups_2024-Update
Sopen12g002940 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 76 110
IPR001611 Leu-rich_rpt 266 324
No external refs found!