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  5. Sopen06g025830

Sopen06g025830


Description : AP2 domain


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g025830
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
A4A49_03231 No alias ap2-like ethylene-responsive transcription factor bbm2 0.05 Orthogroups_2024-Update
A4A49_10848 No alias ethylene-responsive transcription factor rap2-7 0.02 Orthogroups_2024-Update
A4A49_19373 No alias ethylene-responsive transcription factor rap2-7 0.02 Orthogroups_2024-Update
At1g79700 No alias Integrase-type DNA-binding superfamily protein... 0.02 Orthogroups_2024-Update
Bradi3g59300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.B01213.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
Brara.B02033.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Brara.C00427.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
Brara.G01386.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Brara.G01628.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Brara.G03685.1 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
GRMZM2G113078 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G141219 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G174834 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G207100 No alias ARIA-interacting double AP2 domain protein 0.02 Orthogroups_2024-Update
Glyma.03G177500 No alias related to AP2.7 0.03 Orthogroups_2024-Update
Glyma.08G220800 No alias ARIA-interacting double AP2 domain protein 0.02 Orthogroups_2024-Update
Glyma.08G227700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G098450.2 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
MA_121578g0010 No alias (at4g37750 : 394.0) ANT is required for control of cell... 0.04 Orthogroups_2024-Update
MA_130948g0020 No alias (at2g28550 : 293.0) related to AP2.7 (RAP2.7); CONTAINS... 0.02 Orthogroups_2024-Update
Mp7g13270.1 No alias transcription factor (AP2) 0.06 Orthogroups_2024-Update
PSME_00034893-RA No alias (at3g54320 : 243.0) WRINKLED1 encodes transcription... 0.02 Orthogroups_2024-Update
PSME_00035547-RA No alias (at4g36920 : 332.0) Encodes a floral homeotic gene, a... 0.02 Orthogroups_2024-Update
PSME_00039531-RA No alias (at4g37750 : 368.0) ANT is required for control of cell... 0.05 Orthogroups_2024-Update
PSME_00043053-RA No alias (at3g54320 : 248.0) WRINKLED1 encodes transcription... 0.02 Orthogroups_2024-Update
Potri.001G041500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G179900 No alias ARIA-interacting double AP2 domain protein 0.03 Orthogroups_2024-Update
Pp1s131_139V6 No alias ap2 domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s72_220V6 No alias ap2 domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.3G033600.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Seita.9G520500.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Sobic.009G124200.1 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
Solyc05g051380 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.03 Orthogroups_2024-Update
Solyc09g007260 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g040570 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen02g015090 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g005500 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 119 170
IPR001471 AP2/ERF_dom 18 76
No external refs found!