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  5. Bradi1g55990

Bradi1g55990


Description : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein


Gene families : OG_42_0000522 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g55990
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
80470 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
A4A49_34370 No alias increased dna methylation 1 0.05 Orthogroups_2024-Update
At4g14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
GRMZM2G173852 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Glyma.01G238200 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Glyma.01G238300 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Orthogroups_2024-Update
Glyma.02G146500 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Orthogroups_2024-Update
Glyma.11G005300 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.04 Orthogroups_2024-Update
Glyma.11G005500 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Glyma.12G228700 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Glyma.13G271100 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
HORVU5Hr1G094760.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Kfl00059_0330 kfl00059_0330_v1.... (at3g14980 : 157.0) Acyl-CoA N-acyltransferase with... 0.03 Orthogroups_2024-Update
MA_14500g0010 No alias (at1g05380 : 422.0) Acyl-CoA N-acyltransferase with... 0.08 Orthogroups_2024-Update
PSME_00020218-RA No alias (at5g58610 : 358.0) PHD finger transcription factor,... 0.03 Orthogroups_2024-Update
PSME_00027563-RA No alias (at1g05380 : 299.0) Acyl-CoA N-acyltransferase with... 0.02 Orthogroups_2024-Update
Seita.3G002500.1 No alias component *(IDM1) of ROS1-recruitment complex 0.07 Orthogroups_2024-Update
Seita.9G093700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc03g005170 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Solyc09g065340 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 893 933
IPR032308 Jas 779 852
No external refs found!