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Bradi1g56057


Description : Histone superfamily protein


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g56057
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Cre06.g271376 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G072190.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
LOC_Os01g06010 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
PSME_00000376-RA No alias (p54347|h2b4_chlre : 153.0) Histone H2B.4 (H2B-IV) -... 0.02 Orthogroups_2024-Update
Potri.009G028001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G107300.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Seita.6G192900.1 No alias histone *(H2B) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 130
No external refs found!