1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi1g56130

Bradi1g56130


Description : protein containing PDZ domain, a K-box domain, and a TPR region


Gene families : OG_42_0006481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006481_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g56130
Cluster HCCA clusters: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
448423 No alias protein containing PDZ domain, a K-box domain, and a TPR region 0.02 Orthogroups_2024-Update
Brara.E01462.1 No alias protein involved in PS-II assembly *(MET1) 0.03 Orthogroups_2024-Update
Cre01.g031100 No alias protein containing PDZ domain, a K-box domain, and a TPR region 0.04 Orthogroups_2024-Update
Cre10.g439350 No alias protein containing PDZ domain, a K-box domain, and a TPR region 0.02 Orthogroups_2024-Update
Glyma.05G166800 No alias protein containing PDZ domain, a K-box domain, and a TPR region 0.03 Orthogroups_2024-Update
HORVU2Hr1G059060.1 No alias protein involved in PS-II assembly *(MET1) 0.05 Orthogroups_2024-Update
LOC_Os07g07540 No alias SHOOT1 protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp4g23930.1 No alias MET1 protein involved in PS-II assembly 0.02 Orthogroups_2024-Update
Pp1s20_130V6 No alias T5A14.12; expressed protein [Arabidopsis thaliana] 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!