Sopen06g025870

Description : Transcriptional regulator of RNA polII, SAGA, subunit

Gene families : OG_42_0000854 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000854_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g025870
Cluster	HCCA clusters: Cluster_412

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00014609-RA	No alias	(at2g24530 : 84.7) unknown protein; BEST Arabidopsis...	0.02	Orthogroups_2024-Update
Seita.9G081100.1	No alias	component *(ADA1) of SAGA transcription co-activator complex	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	InterProScan predictions
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	5	335

External Links

No external refs found!