Bradi1g56580

Description : photosystem II subunit O-2

Gene families : OG_42_0003125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003125_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g56580
Cluster	HCCA clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07505	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.08	Orthogroups_2024-Update
A4A49_26169	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.08	Orthogroups_2024-Update
A4A49_35879	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.07	Orthogroups_2024-Update
At3g50820	No alias	Oxygen-evolving enhancer protein 1-2, chloroplastic...	0.04	Orthogroups_2024-Update
At5g66570	No alias	Oxygen-evolving enhancer protein 1-1, chloroplastic...	0.03	Orthogroups_2024-Update
Brara.A02119.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.04	Orthogroups_2024-Update
Brara.B03997.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.09	Orthogroups_2024-Update
Brara.I00899.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.09	Orthogroups_2024-Update
Cre09.g396213	No alias	PS II oxygen-evolving complex 1	0.08	Orthogroups_2024-Update
Glyma.01G180800	No alias	photosystem II subunit O-2	0.07	Orthogroups_2024-Update
Glyma.02G061100	No alias	photosystem II subunit O-2	0.08	Orthogroups_2024-Update
Glyma.11G061300	No alias	PS II oxygen-evolving complex 1	0.04	Orthogroups_2024-Update
Glyma.16G143600	No alias	photosystem II subunit O-2	0.06	Orthogroups_2024-Update
HORVU2Hr1G057700.2	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.08	Orthogroups_2024-Update
Kfl00614_0030	kfl00614_0030_v1.1	(q40459\|psbo_tobac : 405.0) Oxygen-evolving enhancer...	0.08	Orthogroups_2024-Update
MA_491379g0010	No alias	(q40459\|psbo_tobac : 419.0) Oxygen-evolving enhancer...	0.03	Orthogroups_2024-Update
Mp6g15300.1	No alias	component PsbO/OEC33 of PS-II oxygen-evolving center	0.06	Orthogroups_2024-Update
Pp1s25_66V6	No alias	oxygen-evolving enhancer protein 1	0.06	Orthogroups_2024-Update
Pp1s306_84V6	No alias	oxygen-evolving enhancer protein 1	0.08	Orthogroups_2024-Update
Pp1s421_3V6	No alias	oxygen-evolving enhancer protein 1	0.06	Orthogroups_2024-Update
Pp1s60_65V6	No alias	oxygen-evolving enhancer protein 1	0.08	Orthogroups_2024-Update
Seita.5G172700.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.09	Orthogroups_2024-Update
Sobic.010G241000.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.12	Orthogroups_2024-Update
Solyc02g065400	No alias	33kDa precursor protein of oxygen-evolving complex	0.07	Orthogroups_2024-Update
Solyc02g090030	No alias	No description available	0.06	Orthogroups_2024-Update
Sopen02g034730	No alias	Manganese-stabilising protein / photosystem II polypeptide	0.09	Orthogroups_2024-Update
evm.model.contig_2663.4	No alias	(p14226\|psbo_pea : 251.0) Oxygen-evolving enhancer...	0.03	Orthogroups_2024-Update
evm.model.tig00020911.43	No alias	(p14226\|psbo_pea : 106.0) Oxygen-evolving enhancer...	0.01	Orthogroups_2024-Update
evm.model.tig00020944.21	No alias	(p12359\|psbo_spiol : 228.0) Oxygen-evolving enhancer...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	InterProScan predictions
MF	GO:0010242	oxygen evolving activity	IEA	InterProScan predictions
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	InterProScan predictions
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006754	ATP biosynthetic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0009496	plastoquinol--plastocyanin reductase activity	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009512	cytochrome b6f complex	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0022904	respiratory electron transport chain	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
MF	GO:0030410	nicotianamine synthase activity	IEP	Predicted GO
BP	GO:0030417	nicotianamine metabolic process	IEP	Predicted GO
BP	GO:0030418	nicotianamine biosynthetic process	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
CC	GO:0045275	respiratory chain complex III	IEP	Predicted GO
BP	GO:0046034	ATP metabolic process	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Predicted GO
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO
MF	GO:0052880	oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002628	PSII_MSP	95	327

External Links

No external refs found!

Bradi1g56580

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation