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  5. Bradi1g56990

Bradi1g56990


Description : RING-H2 group F2A


Gene families : OG_42_0002510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g56990
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
MA_10432852g0020 No alias (at5g22000 : 321.0) encodes a RING-type E3 ubiquitin... 0.02 Orthogroups_2024-Update
Mp4g17090.1 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Pp1s159_31V6 No alias zinc ring-type 0.03 Orthogroups_2024-Update
Sopen06g030260 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000782 telomere cap complex IEP Predicted GO
CC GO:0000783 nuclear telomere cap complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
CC GO:1990879 CST complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 29 70
No external refs found!