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  5. Sopen06g026250

Sopen06g026250


Description : EF hand


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g026250
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
At2g15680 No alias CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8] 0.03 Orthogroups_2024-Update
GRMZM2G106945 No alias EF hand calcium-binding protein family 0.02 Orthogroups_2024-Update
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G068490.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
MA_616616g0010 No alias (at1g24620 : 118.0) EF hand calcium-binding protein... 0.04 Orthogroups_2024-Update
Potri.009G102500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Seita.5G451500.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 16 79
IPR002048 EF_hand_dom 90 151
No external refs found!