Sopen06g026310

Description : Elongation factor Tu GTP binding domain

Gene families : OG_42_0004790 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004790_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g026310
Cluster	HCCA clusters: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g12030	No alias	Translation elongation factor EF1A/initiation factor...	0.03	Orthogroups_2024-Update
Bradi5g05200	No alias	Translation elongation factor EF1A/initiation factor...	0.04	Orthogroups_2024-Update
Cre06.g284750	No alias	Translation elongation factor EF1A/initiation factor...	0.01	Orthogroups_2024-Update
Glyma.05G243400	No alias	Translation elongation factor EF1A/initiation factor...	0.03	Orthogroups_2024-Update
Glyma.08G051200	No alias	Translation elongation factor EF1A/initiation factor...	0.03	Orthogroups_2024-Update
PSME_00005860-RA	No alias	(at1g18070 : 677.0) Translation elongation factor...	0.03	Orthogroups_2024-Update
Potri.T099700	No alias	Translation elongation factor EF1A/initiation factor...	0.02	Orthogroups_2024-Update
Pp1s54_148V6	No alias	eukaryotic peptide chain release factor gtp-binding	0.02	Orthogroups_2024-Update
Seita.7G026700.1	No alias	translation termination factor *(eRF3)	0.02	Orthogroups_2024-Update
Sobic.006G034500.1	No alias	translation termination factor *(eRF3)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	418	526
IPR000795	TF_GTP-bd_dom	101	303
IPR004161	EFTu-like_2	345	412

External Links

No external refs found!