Bradi1g59600

Description : glutamate receptor 3.4

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g59600
Cluster	HCCA clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
At1g42540	No alias	Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]	0.02	Orthogroups_2024-Update
Bradi3g53690	No alias	glutamate receptor 2.7	0.04	Orthogroups_2024-Update
Bradi4g30840	No alias	glutamate receptor 2.7	0.05	Orthogroups_2024-Update
Brara.D01493.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Brara.H01149.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Brara.I00393.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
GRMZM2G148807	No alias	glutamate receptor 3.4	0.02	Orthogroups_2024-Update
Glyma.02G311466	No alias	glutamate receptor 2	0.03	Orthogroups_2024-Update
Glyma.06G233900	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Glyma.13G233300	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
HORVU5Hr1G010420.23	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
HORVU5Hr1G063430.8	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
HORVU5Hr1G072170.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
HORVU7Hr1G031430.5	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
LOC_Os06g06130	No alias	glutamate receptor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g08880	No alias	glutamate receptor 2.7 precursor, putative, expressed	0.03	Orthogroups_2024-Update
MA_10426811g0010	No alias	(at1g05200 : 243.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
MA_9224859g0010	No alias	(at4g35290 : 187.0) Encodes a putative glutamate...	0.03	Orthogroups_2024-Update
PSME_00051451-RA	No alias	(q7xp59\|glr31_orysa : 474.0) Glutamate receptor 3.1...	0.02	Orthogroups_2024-Update
Potri.001G375100	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
Potri.004G052400	No alias	glutamate receptor 2.7	0.04	Orthogroups_2024-Update
Potri.006G172100	No alias	glutamate receptor 2.8	0.02	Orthogroups_2024-Update
Potri.018G012300	No alias	glutamate receptor 2.8	0.03	Orthogroups_2024-Update
Potri.018G013200	No alias	glutamate receptor 2.8	0.03	Orthogroups_2024-Update
Seita.1G346100.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Seita.4G260500.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Seita.4G260900.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Seita.7G214000.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sobic.002G208301.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Sobic.002G208700.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Sobic.004G013200.2	No alias	ligand-gated cation channel *(GLR)	0.05	Orthogroups_2024-Update
Sobic.004G324000.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sobic.010G231500.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Solyc06g063190	No alias	glutamate receptor-like 2.3	0.06	Orthogroups_2024-Update
Sopen06g022660	No alias	Receptor family ligand binding region	0.03	Orthogroups_2024-Update
evm.model.contig_448.19	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006096	glycolytic process	IEP	Predicted GO
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006757	ATP generation from ADP	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009166	nucleotide catabolic process	IEP	Predicted GO
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
CC	GO:0031082	BLOC complex	IEP	Predicted GO
CC	GO:0031083	BLOC-1 complex	IEP	Predicted GO
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Predicted GO
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predicted GO
CC	GO:0031301	integral component of organelle membrane	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0042866	pyruvate biosynthetic process	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
CC	GO:0044445	cytosolic part	IEP	Predicted GO
BP	GO:0046031	ADP metabolic process	IEP	Predicted GO
BP	GO:0046434	organophosphate catabolic process	IEP	Predicted GO
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
BP	GO:0046939	nucleotide phosphorylation	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	474	806
IPR001320	Iontro_rcpt	807	842
IPR001828	ANF_lig-bd_rcpt	47	408

External Links

No external refs found!

Bradi1g59600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation