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  5. Bradi1g59880

Bradi1g59880


Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g59880
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
A4A49_19523 No alias cobra-like protein 4 0.03 Orthogroups_2024-Update
A4A49_19524 No alias protein cobra 0.02 Orthogroups_2024-Update
At1g09790 No alias COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500] 0.04 Orthogroups_2024-Update
At5g60920 No alias Protein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8] 0.02 Orthogroups_2024-Update
Bradi1g08310 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Bradi1g22030 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Brara.B00610.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.05 Orthogroups_2024-Update
Brara.E03592.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Brara.H02796.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Brara.I00668.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.02 Orthogroups_2024-Update
GRMZM2G109326 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.04G160100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.08G249800 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.19G033600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
HORVU3Hr1G007580.3 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.05 Orthogroups_2024-Update
HORVU5Hr1G025760.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.09 Orthogroups_2024-Update
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Orthogroups_2024-Update
PSME_00041222-RA No alias (q60e70|cobl3_orysa : 636.0) COBRA-like 3 protein... 0.06 Orthogroups_2024-Update
PSME_00044523-RA No alias (q60e70|cobl3_orysa : 712.0) COBRA-like 3 protein... 0.02 Orthogroups_2024-Update
Potri.004G167100 No alias COBRA-like protein 1 precursor 0.04 Orthogroups_2024-Update
Potri.015G060000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Potri.015G060100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.08 Orthogroups_2024-Update
Potri.017G098700 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Pp1s44_119V6 No alias protein cobra 0.03 Orthogroups_2024-Update
Seita.9G088500.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Sobic.002G368300.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Solyc02g065770 No alias COBRA protein (AHRD V3.3 *** K4B708_SOLLC) 0.04 Orthogroups_2024-Update
Solyc02g089130 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.05 Orthogroups_2024-Update
Sopen02g015980 No alias COBRA-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 47 210
No external refs found!