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Bradi1g60420


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0006194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g60420
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre04.g226450 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Mp1g17450.1 No alias component Prp17 of non-snRNP MOS4-associated complex 0.03 Orthogroups_2024-Update
PSME_00041381-RA No alias (at1g10580 : 900.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
evm.model.contig_560.12 No alias (at1g10580 : 333.0) Transducin/WD40 repeat-like... 0.01 Orthogroups_2024-Update
evm.model.tig00000663.18 No alias (at1g10580 : 188.0) Transducin/WD40 repeat-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 398 435
IPR001680 WD40_repeat 269 307
IPR001680 WD40_repeat 313 350
IPR001680 WD40_repeat 533 569
IPR001680 WD40_repeat 491 526
No external refs found!