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  5. Sopen06g026500

Sopen06g026500


Description : TCP family transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g026500
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
A4A49_18009 No alias transcription factor tcp4 0.03 Orthogroups_2024-Update
At4g18390 No alias Transcription factor TCP2... 0.02 Orthogroups_2024-Update
Bradi1g58450 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.03 Orthogroups_2024-Update
Glyma.12G228300 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.02 Orthogroups_2024-Update
Glyma.19G030900 No alias plastid transcription factor 1 0.02 Orthogroups_2024-Update
HORVU3Hr1G072670.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g55100 No alias slTCP3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33530 No alias TCP family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_547683g0010 No alias "(at4g18390 : 117.0) ""TEOSINTE BRANCHED 1, cycloidea... 0.03 Orthogroups_2024-Update
Potri.T146100 No alias plastid transcription factor 1 0.02 Orthogroups_2024-Update
Seita.3G391900.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G066100.2 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 114 274
No external refs found!