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  5. Bradi1g62320

Bradi1g62320


Description : INO80 ortholog


Gene families : OG_42_0006128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g62320
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
444050 No alias INO80 ortholog 0.03 Orthogroups_2024-Update
GRMZM2G469162 No alias INO80 ortholog 0.04 Orthogroups_2024-Update
Glyma.03G133700 No alias INO80 ortholog 0.02 Orthogroups_2024-Update
HORVU4Hr1G046140.4 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.04 Orthogroups_2024-Update
MA_3312g0010 No alias (at3g57300 : 1489.0) Encodes the Arabidopsis INO80... 0.05 Orthogroups_2024-Update
Mp8g00130.1 No alias ATPase component Ino80 of chromatin remodelling complex 0.02 Orthogroups_2024-Update
Pp1s45_2V6 No alias chromatin remodeling complex subunit 0.01 Orthogroups_2024-Update
Seita.9G402800.1 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.04 Orthogroups_2024-Update
Sobic.001G370900.2 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.04 Orthogroups_2024-Update
Sopen04g008460 No alias SNF2 family N-terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_664.3 No alias (at3g57300 : 386.0) Encodes the Arabidopsis INO80... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR020838 DBINO 338 463
IPR000330 SNF2_N 574 860
IPR001650 Helicase_C 1177 1289
No external refs found!