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  5. Bradi1g62390

Bradi1g62390


Description : tubby like protein 3


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g62390
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At1g25280 No alias Tubby-like F-box protein 10... 0.03 Orthogroups_2024-Update
At1g47270 No alias Tubby-like F-box protein 6... 0.03 Orthogroups_2024-Update
Brara.J00533.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G062154 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Glyma.08G183100 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Glyma.17G022700 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G074940.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G061930.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g48370 No alias OsFBT1 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00011178-RA No alias (at2g47900 : 345.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Potri.008G195200 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Pp1s222_25V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.2G422900.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G227800.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G372000.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g067680 No alias Tubby-like F-box protein (AHRD V3.3 *** M1APZ0_SOLTU) 0.02 Orthogroups_2024-Update
Sopen04g027400 No alias Tub family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 116 399
IPR001810 F-box_dom 52 99
No external refs found!