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  5. Bradi1g64080

Bradi1g64080


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g64080

Target Alias Description ECC score Gene Family Method Actions
Brara.I01676.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G476593 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G272000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
MA_10032819g0010 No alias (at4g02750 : 712.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
MA_10431508g0010 No alias (at4g02750 : 711.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_121102g0010 No alias (at4g02750 : 643.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
MA_177540g0010 No alias (at4g02750 : 711.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00027758-RA No alias (at4g02750 : 721.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Potri.013G005400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G424600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g064600 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.01 Orthogroups_2024-Update
Sopen06g023080 No alias PPR repeat 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 227 253
IPR002885 Pentatricopeptide_repeat 195 222
IPR002885 Pentatricopeptide_repeat 430 455
IPR002885 Pentatricopeptide_repeat 329 351
IPR002885 Pentatricopeptide_repeat 8 36
IPR002885 Pentatricopeptide_repeat 258 287
IPR002885 Pentatricopeptide_repeat 164 192
IPR002885 Pentatricopeptide_repeat 66 97
IPR002885 Pentatricopeptide_repeat 99 128
IPR032867 DYW_dom 529 654
IPR002885 Pentatricopeptide_repeat 130 163
IPR002885 Pentatricopeptide_repeat 355 402
No external refs found!