Bradi1g65725

Description : GTP binding Elongation factor Tu family protein

Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g65725
Cluster	HCCA clusters: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
169717	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
171512	No alias	GTP binding Elongation factor Tu family protein	0.09	Orthogroups_2024-Update
270693	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
AC233866.1_FG006	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
Brara.B01038.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.18	Orthogroups_2024-Update
Brara.B01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.15	Orthogroups_2024-Update
Brara.C01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.17	Orthogroups_2024-Update
Brara.E01218.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Brara.H02895.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
Brara.I05331.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Brara.J01398.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.09	Orthogroups_2024-Update
GRMZM2G001327	No alias	GTP binding Elongation factor Tu family protein	0.08	Orthogroups_2024-Update
GRMZM2G057535	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
GRMZM2G110509	No alias	GTP binding Elongation factor Tu family protein	0.02	Orthogroups_2024-Update
GRMZM2G149768	No alias	GTP binding Elongation factor Tu family protein	0.11	Orthogroups_2024-Update
GRMZM2G151193	No alias	GTP binding Elongation factor Tu family protein	0.1	Orthogroups_2024-Update
GRMZM2G154218	No alias	GTP binding Elongation factor Tu family protein	0.04	Orthogroups_2024-Update
GRMZM2G343543	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
Glyma.05G089000	No alias	GTP binding Elongation factor Tu family protein	0.08	Orthogroups_2024-Update
Glyma.05G114900	No alias	GTP binding Elongation factor Tu family protein	0.08	Orthogroups_2024-Update
Glyma.19G052400	No alias	GTP binding Elongation factor Tu family protein	0.07	Orthogroups_2024-Update
HORVU0Hr1G017020.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
HORVU4Hr1G056740.5	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.06	Orthogroups_2024-Update
HORVU4Hr1G056820.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
HORVU4Hr1G056830.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
HORVU5Hr1G100200.3	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
HORVU5Hr1G100700.3	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
Kfl00046_0250	kfl00046_0250_v1.1	(o24534\|ef1a_vicfa : 816.0) Elongation factor 1-alpha...	0.01	Orthogroups_2024-Update
Mp3g03620.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	Orthogroups_2024-Update
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.05	Orthogroups_2024-Update
Pp1s59_181V6	No alias	elongation factor 1-	0.02	Orthogroups_2024-Update
Seita.3G265400.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Seita.3G265500.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
Seita.3G265600.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
Seita.3G265700.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.07	Orthogroups_2024-Update
Seita.3G265900.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
Seita.9G442900.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
Seita.9G443000.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.08	Orthogroups_2024-Update
Sobic.010G182100.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.16	Orthogroups_2024-Update
Sobic.010G182200.2	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.1	Orthogroups_2024-Update
Sobic.010G182300.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.17	Orthogroups_2024-Update
Sobic.010G182600.4	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.18	Orthogroups_2024-Update
Solyc06g005060	No alias	elongation factor 1-alpha	0.12	Orthogroups_2024-Update
Solyc06g009960	No alias	Elongation factor 1-alpha (AHRD V3.3 - EF1A_SOLLC)	0.05	Orthogroups_2024-Update
Sopen06g004650	No alias	Elongation factor Tu GTP binding domain	0.21	Orthogroups_2024-Update
Sopen11g027830	No alias	Elongation factor Tu GTP binding domain	0.17	Orthogroups_2024-Update
evm.model.contig_509.2	No alias	(p25698\|ef1a_soybn : 335.0) Elongation factor 1-alpha...	0.17	Orthogroups_2024-Update
evm.model.tig00021352.57	No alias	(o64937\|ef1a_orysa : 717.0) Elongation factor 1-alpha...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0008150	biological_process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	251	315
IPR000795	TF_GTP-bd_dom	24	221
IPR004160	Transl_elong_EFTu/EF1A_C	324	431

External Links

No external refs found!

Bradi1g65725

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation