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  5. Bradi1g66370

Bradi1g66370


Description : histone H2A 6


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g66370
Cluster HCCA clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Cre17.g714500 No alias histone H2A 10 0.01 Orthogroups_2024-Update
Glyma.03G241800 No alias gamma histone variant H2AX 0.03 Orthogroups_2024-Update
HORVU4Hr1G008800.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU5Hr1G105090.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
HORVU6Hr1G006090.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G006130.6 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
MA_9379473g0010 No alias (p35063|h2ax_picab : 189.0) Histone H2AX - Picea abies... 0.02 Orthogroups_2024-Update
Pp1s72_85V6 No alias histone h2a 0.01 Orthogroups_2024-Update
Sobic.009G015900.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
evm.model.tig00001085.4 No alias (p16866|h2a4_volca : 154.0) Histone H2A-IV - Volvox... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 12 101
IPR032454 Histone_H2A_C 104 137
No external refs found!