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  5. Sopen06g027770

Sopen06g027770


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g027770
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_04752 No alias dof zinc finger protein dof3.5 0.03 Orthogroups_2024-Update
A4A49_12312 No alias dof zinc finger protein dof2.1 0.05 Orthogroups_2024-Update
At5g65590 No alias SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2] 0.02 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.C02339.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.D02286.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.E02083.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H01965.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.J01378.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G327189 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.05G037800 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.08G195300 No alias DOF zinc finger protein 1 0.02 Orthogroups_2024-Update
Glyma.13G237500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G072970.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.05 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.02 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
Potri.001G238400 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.007G036400 No alias OBF binding protein 1 0.02 Orthogroups_2024-Update
Potri.009G029500 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Pp1s199_87V6 No alias cycling dof factor 2 0.02 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.002G236600.2 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.003G301700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g065290 No alias Dof zinc finger protein2 0.03 Orthogroups_2024-Update
Solyc02g090220 No alias Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS) 0.02 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.03 Orthogroups_2024-Update
Solyc03g082840 No alias Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) 0.03 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.03 Orthogroups_2024-Update
Solyc06g075370 No alias Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA) 0.04 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.03 Orthogroups_2024-Update
Sopen03g032010 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 55 111
No external refs found!