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  5. Bradi1g70830

Bradi1g70830


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g70830
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
156140 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_15642 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.02 Orthogroups_2024-Update
GRMZM2G169782 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.02G153500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G281700 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.10G020800 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.13G320400 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G010370.2 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 Orthogroups_2024-Update
LOC_Os12g02540 No alias BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Orthogroups_2024-Update
Potri.001G357100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s204_94V6 No alias protein binding 0.05 Orthogroups_2024-Update
Seita.1G217500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g047530 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen06g002790 No alias NPH3 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 210 458
IPR000210 BTB/POZ_dom 24 116
No external refs found!