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  5. Bradi1g72196

Bradi1g72196


Description : FAR1-related sequence 5


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g72196
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Bradi1g20830 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Bradi2g25465 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Bradi2g26120 No alias FAR1-related sequence 5 0.07 Orthogroups_2024-Update
Bradi3g28642 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Bradi3g38179 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi4g23625 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Bradi4g40020 No alias FAR1-related sequence 5 0.05 Orthogroups_2024-Update
HORVU4Hr1G077050.6 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g16660 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g33540 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g61100 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os01g64210 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os03g62660 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g49380 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g18290 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g37630 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g27740 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os10g14040 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
Seita.7G237000.1 No alias FRS/FRF-type transcription factor 0.01 Orthogroups_2024-Update
Seita.9G189000.1 No alias FRS/FRF-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.010G181200.1 No alias FRS/FRF-type transcription factor 0.17 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 228 322
IPR004330 FAR1_DNA_bnd_dom 30 121
No external refs found!