Description : Integrase-type DNA-binding superfamily protein
Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi1g72890 | |
Cluster | HCCA clusters: Cluster_55 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU1Hr1G056500.15 | No alias | AP2-type transcription factor *(WRI/AIL) | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g19060 | No alias | BABY BOOM 1, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Seita.3G033600.1 | No alias | AP2-type transcription factor *(WRI/AIL) | 0.03 | Orthogroups_2024-Update | |
Solyc08g076380 | No alias | AP2-like ethylene-responsive transcription factor (AHRD... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
CC | GO:0009512 | cytochrome b6f complex | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009579 | thylakoid | IEP | Predicted GO |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | Predicted GO |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Predicted GO |
CC | GO:0031361 | integral component of thylakoid membrane | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
CC | GO:0070069 | cytochrome complex | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
No external refs found! |