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  5. Bradi1g74916

Bradi1g74916


Description : ATPase, AAA-type, CDC48 protein


Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g74916
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Brara.A03507.1 No alias platform ATPase CDC48 0.04 Orthogroups_2024-Update
Brara.C03257.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Brara.D01370.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Brara.E03061.1 No alias platform ATPase CDC48 0.02 Orthogroups_2024-Update
Cre06.g269950 No alias ATPase, AAA-type, CDC48 protein 0.03 Orthogroups_2024-Update
Glyma.12G177100 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
MA_10168585g0010 No alias (at3g53230 : 1187.0) ATPase, AAA-type, CDC48 protein;... 0.04 Orthogroups_2024-Update
PSME_00018599-RA No alias (at5g03340 : 512.0) ATPase, AAA-type, CDC48 protein;... 0.02 Orthogroups_2024-Update
PSME_00035217-RA No alias (p54774|cdc48_soybn : 1380.0) Cell division cycle... 0.03 Orthogroups_2024-Update
PSME_00048431-RA No alias (p54774|cdc48_soybn : 494.0) Cell division cycle protein... 0.02 Orthogroups_2024-Update
Potri.006G125500 No alias ATPase, AAA-type, CDC48 protein 0.02 Orthogroups_2024-Update
Pp1s115_6V6 No alias transitional endoplasmic reticulum 0.02 Orthogroups_2024-Update
Pp1s133_13V6 No alias transitional endoplasmic reticulum 0.03 Orthogroups_2024-Update
Pp1s99_139V6 No alias transitional endoplasmic reticulum 0.02 Orthogroups_2024-Update
Seita.9G239600.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
Sobic.001G236300.1 No alias platform ATPase CDC48 0.03 Orthogroups_2024-Update
evm.model.tig00021463.11 No alias (at3g09840 : 945.0) Encodes a cell division cycle... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 34 115
IPR003959 ATPase_AAA_core 249 378
IPR003959 ATPase_AAA_core 522 655
IPR004201 Cdc48_dom2 135 198
No external refs found!