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  5. Bradi1g76307

Bradi1g76307


Description : Polynucleotide adenylyltransferase family protein


Gene families : OG_42_0002409 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g76307
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Brara.F02540.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G078500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g097830 No alias Poly (A) polymerase (AHRD V3.3 *** A0A0B0NTQ5_GOSAR) 0.04 Orthogroups_2024-Update
Sopen03g028570 No alias Poly A polymerase head domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0016779 nucleotidyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR002646 PolA_pol_head_dom 97 226
IPR032828 PolyA_RNA-bd 254 316
No external refs found!